Keto Pepperoni Pizza Pretzels

Two keto pepperoni pizza pretzels on a white plate, with a cup of marinara sauce behind
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Introduction

Sometimes you want something bready enough to feel like a real snack, and that is where keto pretzels come in. We already have a cinnamon version; these take the same idea in a much more savory direction.

They remind us of the Auntie Anne’s pretzels you find in almost any mall in America, except this time there is cheese inside, pepperoni on top, and marinara waiting on the side. They also fill the house with the smell of baking bread, which is honestly better than any candle you could buy.

Are Pretzels Keto Friendly?

Traditional pretzels are mostly flour, so they are not exactly working in our favor when we’re keeping carbs low. If you want the actual numbers, Are Pretzels Keto? has them for hard and soft pretzels.

These use Fat Head dough instead: melted cheese mixed with almond flour, egg, and a few other ingredients until it becomes something you can actually roll and shape. Cheese and almond flour do not sound like they have any business becoming pretzel dough, and yet here we are.

We use the same basic kind of dough for our Garlic Parmesan Keto Pretzels and Keto Cinnamon Pretzels too.

What Makes Them Pizza Pretzels?

This is more than a pretzel with two pepperoni thrown on top and a new name.

The dough gets garlic powder and Italian seasoning, mozzarella is rolled inside each pretzel, and then more cheese and pepperoni go on top before baking. Marinara is there for dipping at the end.

So yes, it is still very much a pretzel. It just wandered through pizza night on the way to the oven.

A Couple of Things Before You Start Shaping

Fat Head dough is shapeable, but it is not traditional wheat dough, so follow the little handling details in the recipe instead of fighting it.

Chill the dough for 30 minutes before you shape it. After that, divide it into four equal portions, lightly wet your hands, and work on parchment paper. Those three setup details are worth getting right before you start on the U-shape and the twist.

Keto Pepperoni Pizza Pretzels

Prep Time
55 minutes
Cook Time
20 minutes
Total Time
1 hour 15 minutes
Yield
4 pretzels
Course
Appetizer
Cuisine
American

Ingredients

All Ingredients

Nutrition Facts

4 servings per recipe
Trans Fat 0g 0% 0g 0%
Sugar Alcohols 0g 0% 0g 0%
Allulose 0g 0% 0g 0%

About these numbers: We are home cooks, not certified nutritionists. Nutrition is shared as a courtesy. We pick a representative product for each ingredient, and our recipe system works out the totals from the amounts in this recipe, so please treat them as a helpful estimate rather than a guarantee. The brands you buy, any swaps you make, and how generously you portion the recipe will all move these numbers.

Directions

  1. Place the cream cheese and 1 ½ cups of the mozzarella cheese into a microwave safe bowl.

  2. Heat the bowl at 30 second intervals in the microwave until the cheeses are combined and completely melted.

  3. Place the cheese into a mixing bowl, and blend in the egg, almond flour, baking powder, xanthan gum, garlic powder, Italian seasoning and salt to taste until a well formed dough has been created.

  4. Place the dough in the fridge to chill for 30 minutes.

  5. Preheat the oven to 350 degrees.

  6. Separate the dough into 4 equal portions.

  7. Wet your hands slightly, and roll each portion of dough into a log shape about 8 inches long on a piece of parchment paper.

  8. Place another piece of parchment paper on top of the log of dough, and roll it out into a flat rectangle about ⅛ to ¼ of an inch thick.

  9. Put a small layer of mozzarella cheese down one end of the rectangle of dough.

  10. Gently roll the dough over the cheese, and pinch the seams closed at the end.

  11. Grab the end of each filled log of dough, and form it into a “U” shape. Twist the dough twice at the top, and fold back down to form a pretzel shape.

  12. Repeat the process until you have made 4 pretzels.

  13. Top each pretzel with four pieces of the pepperoni slices each and sprinkle the remaining cheese on top.

  14. Bake for 20-25 minutes until golden brown and serve with marinara sauce for dipping.

Notes

  • Leftovers keep in the fridge or the freezer, so these are a reasonable make-ahead snack. Reheat at 350°F until heated through to 165°F on a food thermometer.

What to Serve With Them

Marinara is the obvious answer here and it is already part of the recipe. Tear off a piece, dip it, repeat. No complicated dipping-sauce manifesto required.

Have you tried this recipe or any other recipe on the blog? Please rate it below and let us know what you think in the comments! We love hearing from you!

You can also share it on Instagram and use the hashtag #buttertogetherkitchen and we will feature you on our page.

Enjoy!

Updated — September 28, 2026: We removed an incomplete duplicate walkthrough and added clearer notes on the Fat Head dough, shaping, pizza-style toppings, and reheating.

Correction — September 28, 2026: The recipe card's prep time left out the thirty minutes the dough chills in the fridge, so the total time it showed was half an hour short.